BIOPUNK//NEWS
  1. Structural prediction is solved. Function is not. (example-structural-bio.org) Bioinformatics / AI 24 points | crispr_kid | | 6 comments

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[–] clone32 | 6 points | link

We ran this protocol in our community lab last month. Two of five transformations failed until we dropped the heat shock to 42 s. Worth adding a note.

[–] ligase43 | 5 points | link

Sample temperature, measured with a thermocouple in a dummy tube of mineral oil. Plot is in the repo under docs/thermal.

[–] incubate49 | 4 points | link

Trehalose stabilisation is old but the field-deployment data is what makes this worth reading. 40 °C for six weeks is a real number.

[–] buffer31 | 6 points | link

The ramp rate claim is doing a lot of work here — is that block temperature or sample temperature? Those diverge badly above 2 °C/s with thin-wall tubes.

[–] wetware_ann | 3 points | link

Off-target analysis with GUIDE-seq only tells you about the sites you could capture. I would want long-read whole-genome on at least a few animals before "no detectable" goes in a title.

[–] clone18 | 1 point | link

The teardown is beautiful. Note the flow cell is still proprietary, so "open" has a ceiling here.